SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000854
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr19:46833639-46867457
Size: 33818
Super-enhancer rank 854
Number of SE elements: 10
ChIP density(Case|Control): 16137.9496|4183.2866
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: AP2S1 ;
ROSE Overlap AP2S1 ;
ROSE Proximal SNAR-E ; SLC1A5 ;
ROSE Closest AP2S1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SLC1A5 ; SNAR-E ; AP2S1 ; ARHGAP35 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000854 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers