SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000828
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr9:14880851-14911509
Size: 30658
Super-enhancer rank 828
Number of SE elements: 10
ChIP density(Case|Control): 16389.7668|4190.9486
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: FREM1 ;
ROSE Overlap FREM1 ;
ROSE Proximal ;
ROSE Closest FREM1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC389705 ; FREM1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000828 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers