SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000791
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr4:78544994-78592801
Size: 47807
Super-enhancer rank 791
Number of SE elements: 19
ChIP density(Case|Control): 18816.8352|6257.9363
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ANXA3 ;
ROSE Overlap ANXA3 ;
ROSE Proximal ;
ROSE Closest ANXA3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01094 ; ANXA3 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000791 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers