SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000763
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr7:104942818-104984969
Size: 42151
Super-enhancer rank 763
Number of SE elements: 8
ChIP density(Case|Control): 18112.2847|5319.4562
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LINC01004 ;
ROSE Overlap LINC01004 ;
ROSE Proximal LHFPL3-AS2 ; KMT2E-AS1 ; KMT2E ;
ROSE Closest LINC01004 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC01004 ; KMT2E ; KMT2E-AS1 ; LHFPL3-AS2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000763 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers