SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000758
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:36148486-36162534
Size: 14048
Super-enhancer rank 758
Number of SE elements: 4
ChIP density(Case|Control): 14639.4208|1798.144
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MAP7D1 ;
ROSE Overlap TRAPPC3 ; MAP7D1 ;
ROSE Proximal MAP7D1 ; COL8A2 ; TRAPPC3 ;
ROSE Closest MAP7D1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA THRAP3 ; TRAPPC3 ; MAP7D1 ; TEKT2 ; COL8A2 ; ADPRHL2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000758 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers