SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000748
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:81323094-81346985
Size: 23891
Super-enhancer rank 748
Number of SE elements: 3
ChIP density(Case|Control): 15328.4656|2420.1583
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMEM105 ;
ROSE Overlap TMEM105 ;
ROSE Proximal LINC00482 ; LOC100130370 ; SLC38A10 ;
ROSE Closest TMEM105 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C17orf89 ; ENTHD2 ; LOC100130370 ; TMEM105 ; BAHCC1 ; SLC38A10 ; LINC00482 ; MIR4740 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000748 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers