SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000657
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr8:127870084-127929549
Size: 59465
Super-enhancer rank 657
Number of SE elements: 11
ChIP density(Case|Control): 20777.071|6796.8495
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PVT1 ;
ROSE Overlap PVT1 ;
ROSE Proximal MIR1205 ; TMEM75 ;
ROSE Closest PVT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PVT1 ; TMEM75 ; MIR1205 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000657 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers