SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000627
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:9647106-9674275
Size: 27169
Super-enhancer rank 627
Number of SE elements: 11
ChIP density(Case|Control): 18512.9566|4143.2725
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLEC2D ;
ROSE Overlap LOC374443 ; CLEC2D ;
ROSE Proximal LOC374443 ; KLRB1 ;
ROSE Closest CLEC2D ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LOC374443 ; CLEC2D ; KLRB1 ; CLECL1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000627 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers