SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000587
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr10:21515986-21529482
Size: 13496
Super-enhancer rank 587
Number of SE elements: 2
ChIP density(Case|Control): 16591.9824|1723.4392
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SKIDA1 ;
ROSE Overlap SKIDA1 ;
ROSE Proximal MLLT10 ; CASC10 ; MIR1915 ;
ROSE Closest SKIDA1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SKIDA1 ; CASC10 ; MLLT10 ; MIR1915 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000587 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers