Super-enhancer overview
| SE ID: | SE_02_156000585 |
| Species: | Human |
| Data source: | NCBI GEO/SRA |
| Biosample type: | Cell line |
| Tissue type: | Gastrointestinal Stromal |
| Biosample name: | GIST-9_PDGFRA e18 |
| Genomic region: | chr5:141506643-141530569 |
| Size: | 23926 |
| Super-enhancer rank | 585 |
| Number of SE elements: | 6 |
| ChIP density(Case|Control): | 17839.2256|2966.824 |
| Genome browser: | 
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Super-enhancer annotation
eQTL
eRNA1~5
5~10
10~MAX
Super-enhancer associated genes
| Strategies/Algorithm | Gene name |
| The closest active: | PCDHGC5 ; |
| ROSE Overlap | PCDHGB5 ; PCDHGB1 ; PCDHGC4 ; PCDHGA1 ; PCDHGA6 ; PCDHGB2 ; PCDHGA2 ; PCDHGA4 ; PCDHGB3 ; PCDHGC3 ; PCDHGA3 ; PCDHGA11 ; PCDHGA8 ; PCDHGA10 ; PCDHGA12 ; PCDHGA9 ; PCDHGB6 ; PCDHGA7 ; PCDHGC5 ; PCDHGB7 ; DIAPH1 ; PCDHGA5 ; PCDHGB4 ; |
| ROSE Proximal | PCDHGC5 ; PCDHGC3 ; LOC100505658 ; PCDHGC4 ; |
| ROSE Closest | PCDHGC5 ; |
| Lasso | ; |
| PreSTIGE | ; |
| ABC | ; |
| BETA | PCDHGA11 ; PCDHGC4 ; PCDHGC3 ; PCDHGB8P ; LOC100505658 ; PCDHGC5 ; PCDHGA12 ; |