SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000505
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:78910213-78937996
Size: 27783
Super-enhancer rank 505
Number of SE elements: 11
ChIP density(Case|Control): 19184.1615|2939.4414
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TIMP2 ;
ROSE Overlap TIMP2 ;
ROSE Proximal CEP295NL ; LGALS3BP ;
ROSE Closest TIMP2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KIAA1731NL ; TIMP2 ; LGALS3BP ; CANT1 ; C1QTNF1 ; USP36 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000505 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers