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Super-enhancer overview

SE ID: SE_02_156000482
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:14767677-14782101
Size: 14424
Super-enhancer rank 482
Number of SE elements: 5
ChIP density(Case|Control): 19120.4544|2303.5128
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: H2AFJ ;
ROSE Overlap H2AFJ ; HIST4H4 ;
ROSE Proximal C12orf60 ; SMCO3 ; WBP11 ;
ROSE Closest H2AFJ ;
Lasso ;
PreSTIGE ;
ABC ;
BETA H2AFJ ; SMCO3 ; GUCY2C ; HIST4H4 ; WBP11 ; C12orf60 ; ART4 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000482 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers