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Super-enhancer overview

SE ID: SE_02_156000470
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:77096120-77166338
Size: 70218
Super-enhancer rank 470
Number of SE elements: 25
ChIP density(Case|Control): 25341.6762|8229.5496
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SEC14L1 ;
ROSE Overlap SEC14L1 ;
ROSE Proximal MIR6516 ; SEC14L1 ; SCARNA16 ;
ROSE Closest SEC14L1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SEC14L1 ; SNHG20 ; SCARNA16 ; MIR6516 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000470 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers