SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000460
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr6:163395550-163422014
Size: 26464
Super-enhancer rank 460
Number of SE elements: 9
ChIP density(Case|Control): 20890.6816|3622.9216
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CAHM ;
ROSE Overlap QKI ; CAHM ;
ROSE Proximal QKI ; DKFZp451B082 ;
ROSE Closest CAHM ;
Lasso ;
PreSTIGE ;
ABC ;
BETA QKI ; CAHM ; PACRG-AS1 ; DKFZp451B082 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000460 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers