SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000445
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:70136204-70220086
Size: 83882
Super-enhancer rank 445
Number of SE elements: 17
ChIP density(Case|Control): 28662.4794|11181.4706
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KCNJ2 ;
ROSE Overlap KCNJ2 ; KCNJ2-AS1 ;
ROSE Proximal KCNJ16 ;
ROSE Closest KCNJ2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KCNJ2 ; KCNJ16 ; KCNJ2-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000445 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers