SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000411
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr2:177229307-177296694
Size: 67387
Super-enhancer rank 411
Number of SE elements: 19
ChIP density(Case|Control): 26873.9356|8773.7874
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NFE2L2 ;
ROSE Overlap NFE2L2 ; MIR3128 ; LOC100130691 ;
ROSE Proximal MIR4444-1 ; MIR6512 ; HNRNPA3 ;
ROSE Closest NFE2L2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA NFE2L2 ; HNRNPA3 ; MIR3128 ; MIR4444-1 ; MIR4444-2 ; MIR6512 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000411 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers