SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000404
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr8:116618615-116697313
Size: 78698
Super-enhancer rank 404
Number of SE elements: 29
ChIP density(Case|Control): 29031.6922|10765.8864
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EIF3H ;
ROSE Overlap EIF3H ;
ROSE Proximal ;
ROSE Closest EIF3H ;
Lasso ;
PreSTIGE ;
ABC ;
BETA EIF3H ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000404 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers