SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000391
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr5:160344936-160386278
Size: 41342
Super-enhancer rank 391
Number of SE elements: 13
ChIP density(Case|Control): 23825.3946|5287.6418
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: C1QTNF2 ;
ROSE Overlap C1QTNF2 ;
ROSE Proximal CCNJL ; ZBED8 ; PTTG1 ; SLU7 ;
ROSE Closest C1QTNF2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PTTG1 ; CCNJL ; ZBED8 ; SLU7 ; C1QTNF2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000391 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers