SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000384
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr7:130391769-130454472
Size: 62703
Super-enhancer rank 384
Number of SE elements: 15
ChIP density(Case|Control): 27282.0753|8671.8249
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CEP41 ;
ROSE Overlap CEP41 ;
ROSE Proximal MEST ; CPA1 ; MESTIT1 ; CPA5 ; CEP41 ; MIR335 ;
ROSE Closest CEP41 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MEST ; CEP41 ; MIR335 ; CPA1 ; MESTIT1 ; CPA5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000384 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers