SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000382
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr2:218254141-218266534
Size: 12393
Super-enhancer rank 382
Number of SE elements: 1
ChIP density(Case|Control): 20322.0414|1695.3624
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GPBAR1 ;
ROSE Overlap ARPC2 ; GPBAR1 ; AAMP ;
ROSE Proximal AAMP ; PNKD ; MIR6513 ; TMBIM1 ;
ROSE Closest GPBAR1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA GPBAR1 ; MIR6810 ; AAMP ; PNKD ; CXCR1 ; CATIP ; CATIP-AS2 ; ARPC2 ; TMBIM1 ; MIR6513 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000382 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers