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Super-enhancer overview

SE ID: SE_02_156000381
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:74981431-75013586
Size: 32155
Super-enhancer rank 381
Number of SE elements: 5
ChIP density(Case|Control): 22373.449|3691.394
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDR2L ;
ROSE Overlap CDR2L ; ICT1 ;
ROSE Proximal HID1-AS1 ; ATP5H ; HID1 ; KCTD2 ; ICT1 ; OTOP3 ;
ROSE Closest CDR2L ;
Lasso ;
PreSTIGE ;
ABC ;
BETA KCTD2 ; SLC16A5 ; CDR2L ; USH1G ; HID1 ; ATP5H ; OTOP3 ; ICT1 ; HID1-AS1 ; OTOP2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000381 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers