SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000348
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr10:132480306-132541338
Size: 61032
Super-enhancer rank 348
Number of SE elements: 10
ChIP density(Case|Control): 23503.4232|4095.2472
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: INPP5A ;
ROSE Overlap INPP5A ;
ROSE Proximal C10orf91 ;
ROSE Closest INPP5A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA INPP5A ; C10orf91 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000348 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers