SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000326
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr11:134022347-134051081
Size: 28734
Super-enhancer rank 326
Number of SE elements: 8
ChIP density(Case|Control): 23550.3864|3445.2066
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC100128239 ;
ROSE Overlap LOC100128239 ;
ROSE Proximal JAM3 ;
ROSE Closest LOC100128239 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA JAM3 ; LOC100128239 ; IGSF9B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000326 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers