SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000296
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr9:98940062-98999671
Size: 59609
Super-enhancer rank 296
Number of SE elements: 19
ChIP density(Case|Control): 27712.2241|7027.9011
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COL15A1 ;
ROSE Overlap COL15A1 ;
ROSE Proximal ;
ROSE Closest COL15A1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA COL15A1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000296 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers