SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000288
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr17:27293000-27364878
Size: 71878
Super-enhancer rank 288
Number of SE elements: 13
ChIP density(Case|Control): 29527.4824|8488.7918
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WSB1 ;
ROSE Overlap MIR4522 ; WSB1 ;
ROSE Proximal ;
ROSE Closest WSB1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA WSB1 ; TBC1D3P5 ; MIR4522 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000288 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers