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Super-enhancer overview

SE ID: SE_02_156000176
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr12:49967276-50033058
Size: 65782
Super-enhancer rank 176
Number of SE elements: 12
ChIP density(Case|Control): 34614.4884|8485.878
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RACGAP1 ;
ROSE Overlap RACGAP1 ; AQP6 ;
ROSE Proximal ASIC1 ; AQP2 ; AQP5 ; LOC101927318 ; RACGAP1 ;
ROSE Closest RACGAP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA AQP6 ; LOC101927318 ; ASIC1 ; RACGAP1 ; SMARCD1 ; FAIM2 ; LOC101927292 ; AQP2 ; LOC283332 ; AQP5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000176 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers