SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000099
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr9:130771795-130862741
Size: 90946
Super-enhancer rank 99
Number of SE elements: 26
ChIP density(Case|Control): 46282.4194|12450.5074
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ABL1 ;
ROSE Overlap ABL1 ;
ROSE Proximal QRFP ;
ROSE Closest ABL1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ABL1 ; QRFP ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000099 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers