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Super-enhancer overview

SE ID: SE_02_156000081
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr5:149406656-149436940
Size: 30284
Super-enhancer rank 81
Number of SE elements: 1
ChIP density(Case|Control): 41316.4612|4279.1292
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR143 ;
ROSE Overlap MIR143HG ; MIR145 ; MIR143 ;
ROSE Proximal PCYOX1L ; GRPEL2-AS1 ; IL17B ;
ROSE Closest MIR143 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PCYOX1L ; IL17B ; GRPEL2 ; MIR143HG ; MIR145 ; MIR143 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000081 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers