SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_156000078
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr10:6008417-6102391
Size: 93974
Super-enhancer rank 78
Number of SE elements: 25
ChIP density(Case|Control): 49806.22|12150.8382
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: IL2RA ;
ROSE Overlap RBM17 ; IL2RA ;
ROSE Proximal IL2RA ; IL15RA ; MIR3155A ; MIR3155B ; PFKFB3 ;
ROSE Closest IL2RA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PFKFB3 ; RBM17 ; IL15RA ; IL2RA ; MIR3155A ; MIR3155B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000078 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers