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Super-enhancer overview

SE ID: SE_02_156000027
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr1:226626371-226739361
Size: 112990
Super-enhancer rank 27
Number of SE elements: 39
ChIP density(Case|Control): 69590.541|14564.411
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITPKB-IT1 ;
ROSE Overlap ITPKB ; ITPKB-IT1 ;
ROSE Proximal ;
ROSE Closest ITPKB-IT1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ITPKB-IT1 ; ITPKB ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000027 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers