SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_156000026
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Gastrointestinal Stromal
Biosample name: GIST-9_PDGFRA e18
Genomic region: chr11:10558330-10676573
Size: 118243
Super-enhancer rank 26
Number of SE elements: 28
ChIP density(Case|Control): 72979.5796|16187.4667
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MRVI1 ;
ROSE Overlap MRVI1 ; LYVE1 ; MRVI1-AS1 ;
ROSE Proximal MRVI1 ; MTRNR2L8 ; RNF141 ;
ROSE Closest MRVI1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA MRVI1 ; LYVE1 ; RNF141 ; MRVI1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_156000026 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers