SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_143600005
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Primary cell
Tissue type: Liver
Biosample name: LSEC-Ctrl
Genomic region: chr17:48537172-48595673
Size: 58501
Super-enhancer rank 5
Number of SE elements: 1
ChIP density(Case|Control): 155823.2636|6189.4058
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXB3;
ROSE Overlap HOXB5; HOXB2; HOXB-AS1; HOXB-AS3; MIR10A; HOXB3; HOXB4;
ROSE Proximal HOXB1; HOXB-AS3; HOXB7; HOXB9; HOXB6; HOXB8; MIR196A1;
ROSE Closest HOXB3;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_143600005 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers