SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_123900271
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Skin
Biosample name: Waga_virus_positive
Genomic region: chr1:12315380-12346146
Size: 30766
Super-enhancer rank 271
Number of SE elements: 16
ChIP density(Case|Control): 41340.2742|3067.3702
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS13D;
ROSE Overlap VPS13D;
ROSE Proximal ;
ROSE Closest VPS13D;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_123900271 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers