SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122901303
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr12:121397137-121428903
Size: 31766
Super-enhancer rank 1303
Number of SE elements: 18
ChIP density(Case|Control): 16724.799|3535.5558
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNF34 ;
ROSE Overlap RNF34 ;
ROSE Proximal MIR7107 ; RNF34 ; ANAPC5 ;
ROSE Closest RNF34 ;
Lasso ANAPC5 ; CAMKK2 ; RNF34 ;
PreSTIGE ;
ABC ;
BETA MIR7107 ; RNF34 ; ANAPC5 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122901303 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers