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Super-enhancer overview

SE ID: SE_02_122900685
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Control
Genomic region: chr21:42858837-42902096
Size: 43259
Super-enhancer rank 685
Number of SE elements: 11
ChIP density(Case|Control): 27638.1751|7803.9236
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WDR4 ;
ROSE Overlap WDR4 ; NDUFV3 ;
ROSE Proximal NDUFV3 ; MIR5692B ; ERVH48-1 ;
ROSE Closest WDR4 ;
Lasso WDR4 ; NDUFV3 ; PKNOX1 ; U2AF1 ;
PreSTIGE ;
ABC ;
BETA NDUFV3 ; WDR4 ; MIR5692B ; PKNOX1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122900685 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers