SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300567
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr9:127775613-127780986
Size: 5373
Super-enhancer rank 567
Number of SE elements: 2
ChIP density(Case|Control): 24559.4457|923.0814
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH2D3C ;
ROSE Overlap SH2D3C ;
ROSE Proximal SH2D3C ; CDK9 ; TOR2A ; FPGS ; MIR2861 ; MIR3960 ;
ROSE Closest SH2D3C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA C9orf117 ; TOR2A ; SH2D3C ; FPGS ; MIR3911 ; ENG ; MIR4672 ; MIR2861 ; PTRH1 ; TTC16 ; CDK9 ; AK1 ; MIR3960 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300567 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers