SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122300433
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: KMS28BM
Genomic region: chr1:39569974-39607025
Size: 37051
Super-enhancer rank 433
Number of SE elements: 9
ChIP density(Case|Control): 32015.7691|4509.1067
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PABPC4 ;
ROSE Overlap LOC101929516 ; PABPC4 ;
ROSE Proximal HEYL ; PPIEL ; SNORA55 ; PABPC4 ;
ROSE Closest PABPC4 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA HEYL ; PABPC4 ; LOC101929516 ; NT5C1A ; PPIEL ; SNORA55 ; BMP8A ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122300433 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers