SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_122000560
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Bone marrow
Biosample name: JJN3
Genomic region: chr5:217163-220465
Size: 3302
Super-enhancer rank 560
Number of SE elements: 1
ChIP density(Case|Control): 23876.1016|1243.8634
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SDHA ;
ROSE Overlap SDHA ; CCDC127 ;
ROSE Proximal SDHA ; LRRC14B ;
ROSE Closest SDHA ;
Lasso ;
PreSTIGE ;
ABC ;
BETA PDCD6 ; CCDC127 ; LOC102467073 ; SDHA ; AHRR ; PLEKHG4B ; LRRC14B ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_122000560 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers