SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_118500114
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Brain
Biosample name: GBM14
Genomic region: chr1:30844177-30929654
Size: 85477
Super-enhancer rank 114
Number of SE elements: 28
ChIP density(Case|Control): 59774.0661|8607.5339
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SDC3 ;
ROSE Overlap SDC3 ;
ROSE Proximal SNORD103A ; SNORD85 ;
ROSE Closest SDC3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA SNORD103B ; SNORD103A ; SDC3 ; SNORD85 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_118500114 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers