SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_116700340
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Biliary
Biosample name: H69_TGF Vehicle_1
Genomic region: chr3:50155078-50182764
Size: 27686
Super-enhancer rank 340
Number of SE elements: 7
ChIP density(Case|Control): 45983.6774|3585.337
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR566;
ROSE Overlap MIR566; SEMA3F;
ROSE Proximal GNAI2; GNAT1; MIR5787; SLC38A3;
ROSE Closest MIR566;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_116700340 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers