SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_116200096
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Stomach
Biosample name: YCC11
Genomic region: chr12:54249626-54288755
Size: 39129
Super-enhancer rank 96
Number of SE elements: 15
ChIP density(Case|Control): 106313.493|8839.2411
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CBX5;
ROSE Overlap CBX5; HNRNPA1;
ROSE Proximal COPZ1; NFE2; MIR3198-2; MIR148B;
ROSE Closest CBX5;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_116200096 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers