SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_116000232
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Stem cell
Tissue type: Embryo
Biosample name: H1_shLuc
Genomic region: chr3:50237999-50265820
Size: 27821
Super-enhancer rank 232
Number of SE elements: 10
ChIP density(Case|Control): 9612.1555|3001.8859
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GNAI2;
ROSE Overlap GNAI2;
ROSE Proximal HYAL1; SEMA3B; IFRD2; MIR6872; MIR5787; GNAT1; HYAL3; NAT6; SLC38A3; SEMA3B-AS1; LSMEM2;
ROSE Closest GNAI2;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_116000232 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers