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Super-enhancer overview

SE ID: SE_02_113000689
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Haematopoietic and lymphoid tissue bone marrow
Biosample name: K562_Np63_expressing
Genomic region: chr4:169604099-169628880
Size: 24781
Super-enhancer rank 689
Number of SE elements: 8
ChIP density(Case|Control): 28555.1463|4490.3172
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NEK1 ;
ROSE Overlap NEK1 ; CLCN3 ;
ROSE Proximal CLCN3 ;
ROSE Closest NEK1 ;
Lasso C4orf27 ;
PreSTIGE ;
ABC ;
BETA CLCN3 ; NEK1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_113000689 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers