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Super-enhancer overview

SE ID: SE_02_109100503
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_shRING1B_8hr
Genomic region: chr20:49276864-49282154
Size: 5290
Super-enhancer rank 503
Number of SE elements: 1
ChIP density(Case|Control): 12078.128|690.874
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SNORD12C ;
ROSE Overlap SNORD12B ; ZFAS1 ; SNORD12 ; SNORD12C ; ZNFX1 ;
ROSE Proximal ZFAS1 ;
ROSE Closest SNORD12C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ZFAS1 ; STAU1 ; SNORD12C ; DDX27 ; SNORD12B ; ZNFX1 ; SNORD12 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_109100503 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers