SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800390
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr21:39316416-39333753
Size: 17337
Super-enhancer rank 390
Number of SE elements: 3
ChIP density(Case|Control): 35572.0566|1740.6348
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: BRWD1-AS1 ;
ROSE Overlap BRWD1-AS1 ;
ROSE Proximal HMGN1 ; BRWD1 ; WRB ; BRWD1-IT2 ;
ROSE Closest BRWD1-AS1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA WRB ; BRWD1 ; HMGN1 ; BRWD1-IT2 ; BRWD1-AS1 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800390 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers