SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_108800233
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Mammary gland
Biosample name: T47D_shCtrl_45min
Genomic region: chr12:52242148-52250758
Size: 8610
Super-enhancer rank 233
Number of SE elements: 1
ChIP density(Case|Control): 47400.633|1226.925
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KRT7 ;
ROSE Overlap KRT7 ;
ROSE Proximal LINC00592 ; C12orf80 ; KRT81 ;
ROSE Closest KRT7 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA LINC00592 ; KRT81 ; KRT7 ; C12orf80 ; KRT83 ; KRT80 ; KRT86 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_108800233 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers