SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_107800079
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Muscle
Biosample name: RMS235_PAX3-NCOA1
Genomic region: chr17:43231377-43252523
Size: 21146
Super-enhancer rank 79
Number of SE elements: 5
ChIP density(Case|Control): 64089.2968|9082.207
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RNU2-1;
ROSE Overlap RNU2-1;
ROSE Proximal TMEM106A; LINC00854;
ROSE Closest RNU2-1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_107800079 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers