SEdb 2.0
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Super-enhancer overview

SE ID: SE_02_107800074
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Muscle
Biosample name: RMS235_PAX3-NCOA1
Genomic region: chr17:40339101-40355129
Size: 16028
Super-enhancer rank 74
Number of SE elements: 4
ChIP density(Case|Control): 61904.9444|6026.528
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RARA-AS1;
ROSE Overlap RARA-AS1; RARA;
ROSE Proximal RARA; GJD3;
ROSE Closest RARA-AS1;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_107800074 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers