SEdb 2.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_107800001
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Tissue
Tissue type: Muscle
Biosample name: RMS235_PAX3-NCOA1
Genomic region: chr16:959314-1057484
Size: 98170
Super-enhancer rank 1
Number of SE elements: 31
ChIP density(Case|Control): 403184.19|67413.339
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ;
ROSE Overlap LMF1; SOX8;
ROSE Proximal LMF1-AS1; SSTR5; C1QTNF8; LMF1; SSTR5-AS1;
ROSE Closest SOX8;
Lasso ;
PreSTIGE ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_107800001 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
GREAT Download bed

Overlap with other super-enhancers