SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_102500579
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Esophagus
Biosample name: KYSE150
Genomic region: chr20:45771434-45788282
Size: 16848
Super-enhancer rank 579
Number of SE elements: 6
ChIP density(Case|Control): 26547.3936|3802.5936
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: WFDC3 ;
ROSE Overlap WFDC3 ;
ROSE Proximal DNTTIP1 ; TNNC2 ; SNX21 ; UBE2C ; SPINT4 ;
ROSE Closest WFDC3 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA UBE2C ; SNX21 ; ZSWIM3 ; WFDC3 ; MIR3617 ; SPINT4 ; WFDC13 ; ACOT8 ; WFDC10B ; DNTTIP1 ; TNNC2 ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_102500579 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers